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NEON Soil Preferential Flow Database


An older version of this resource http://www.hydroshare.org/resource/a447dc8a74f44736bf3fe217c9228005 is available.
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Created: Sep 30, 2025 at 12:51 a.m. (UTC)
Last updated: Sep 30, 2025 at 1:11 p.m. (UTC)
Published date: Sep 30, 2025 at 1:12 p.m. (UTC)
DOI: 10.4211/hs.847b15cd15524b78acd58a2a8be242c1
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Abstract

Preferential flow in soil important in supporting water and nutrients transportations. We derivate a preferential flow database using multi-depth soil moisture and precipitation measurements in NEON sites. The database contains water flow velocity for each precipitation event for any given sensor, site characteristics, soil characteristics at each sensor depth etc. The v1.1 expands the last version by incorporating different Ksat estimates from Rosetta as a threshold for velocity thresholding method for identifying preferential flow. Please also be noted that sites in Alaska {"BONA", "DEJU", "HEAL", "TOOL", "BARR" } are not recommended to use. Additionally, "KONA" is not include in our analysis, as it is closer to "KONZ".

Subject Keywords

Coverage

Spatial

Coordinate System/Geographic Projection:
WGS 84 EPSG:4326
Coordinate Units:
Decimal degrees
North Latitude
70.9693°
East Longitude
-46.0903°
South Latitude
9.1310°
West Longitude
-164.9193°

Temporal

Start Date:
End Date:

Content

README.md

About the dataset

This PF database is a preferential flow database that is generated by using NEON soil moisture and precipitation.

Metadata for PF base file

File format: XXXX_PF_database_00Y where xxxx is the NEON site name and y is the soil profile number ranging from 1 to 5.

Event data fields * stormStartTime [UTC] : Precipitation event starts.

  • stormEndTime [UTC] : Precipitation event ends.

  • stormStartValue [mm/10min] : The precipitation at the time step, in which precipitation events starts.

  • stormEndValue [mm/10min] : The precipitation at the time step, in which precipitation events ends.

  • stormSum [mm] : Sum of precipitation of the precipitation event.

  • stormPeakIntensity [mm/10min] : The max precipitation for a given precipitation event.

  • stormPeakTime [UTC] : The time, in which stormPeakIntensity is observed.

  • stormDuration [hours] : The duration of the precipitation events.

  • smReponseType_50X [-] : If the sensor responded to a precipitation event. X represent the sensor position from 1 - 8 in most of the case.

  • smOnsetTime_50X [UTC] : Soil moisture onset time.

  • smPeakTime_50X [UTC] : Soil moisture peak time.

  • smAtOnset_50X [v/v] : Soil moisture value at the onset.

  • smAtPeak_50X [v/v] : Soil moisture value at the peak.

  • smBeforePrecip_50X [v/v] : Soil moisture value right before precipitation start.

  • flowTypes [-] : Type of flows. notApplicable = less than 2 sensors are working. nonSequentialFlow = at least 2 sensors responded to the precipitation event and the shallower sensor responses later than the deeper sensor. SequentialFlow = at least 2 sensors responded to the precipitation event and the shallower sensor responded earlier than the deeper sensor.

  • flowPosition [-] : record which two sensors are involved in preferential flow. [501Xvs50Y_PF_50Y] = nonsequantial flow while comparing two sensors. The deeper sensor of each combo is recorded.

  • velocity_computed_50X [cm/day]: The log scale computed flow velocity.

  • num_velocity_50X_median [cm/day] : The median of matrix flow velocity by a model in log scale.

  • num_velocity_50X_95th [cm/day] : The 95th percentile of matrix flow velocity by a model in log scale.

  • num_velocity_50X_99th [cm/day] : The 99th percentile of matrix flow velocity by a model in log scale.

  • ksat_50X [cm/d]: The max of depth weighted Ksat from Rosetta3 model across all pits at a given depth in log scale.

  • ksat_low_50X [cm/d]: The max depth weighted Ksat - Ksat S.d. from Rosetta3 model across all pits at a given depth in log scale.

  • ksat_high_50X [cm/d]: The max depth weighted Ksat + Ksat S.d. from Rosetta3 model across all pits at a given depth in log scale.

  • ksat_std_median_50X [cm/d]: The median depth weighted Ksat from Rosetta3 model across all pits at a given depth in log scale.

  • ksat_std_upper_50X [cm/d]: The median depth weighted Ksat + S.D of depth weighted Ksat from Rosetta3 model across all pits at a given depth in log scale.

  • PF_velocity_metric_50X [-] : Compared the velocity_computed_50X to ksat_50X. PF is identified (assigned as True) if velocity_computed_50X is greater than ksat_50X.

  • PF_ksat_metric_low_50X [-] : Compared the velocity_computed_50X to ksat_low_50X. PF is identified (assigned as True) if velocity_computed_50X is greater than PF_ksat_metric_low_50X.

  • PF_ksat_metric_high_50X [-] : Compared the velocity_computed_50X to ksat_high_50X. PF is identified (assigned as True) if velocity_computed_50X is greater than ksat_high_50X.

  • PF_ksat_metric_std_median_50X [-] : Compared the velocity_computed_50X to ksat_std_median_50X. PF is identified (assigned as True) if velocity_computed_50X is greater than ksat_std_median_50X.

  • PF_ksat_metric_std_upper_50X [-] : Compared the velocity_computed_50X to ksat_std_upper_50X. PF is identified (assigned as True) if velocity_computed_50X is greater than ksat_std_upper_50X.

  • PF_ksat_metric_50X [-] : Compared the velocity_computed_50X to num_velocity_50X_99th. PF is identified (assigned as True) if velocity_computed_50X is greater than num_velocity_50X_99th.

  • num_velocity_name_50X [-] : The depth name where the velocity_computed_50X compares to.

  • sensor_nake_name_50X [-]:The nake name of the sensor format as soil plot name_sensor position i.e., 001_501 represent the top sensor of the first soil plot/profile at a site.

Other data fields

  • total_sand_50X [%]: The weighted sand percentage based on soil information for megapits and distributed pits.

  • total_silt_50X [%]: The weighted silt percentage based on soil information for megapits and distributed pits.

  • total_clay_50X [%]: The weighted clay percentage based on soil information for megapits and distributed pits.

  • total_porosity_50X [-]:The weighted porosity based on soil information for megapits and distributed pits.

  • total_eff_porosity_50X [-]:The weighted effective porosity based on soil information for megapits and distributed pits.

  • total_root_density_50X [$g/cm^3$]:The weighted root density based on root sampling for megapits and distributed pits.

  • latitude [-]: site latitude.

  • longitude [-]: sitle longitude.

  • aridity [-]: The aridity index at the site as PET/P.

  • MAT [°C]: Mean annual temperature of the site.

  • MAP [mm]: Mean annual precipitation of the site.

  • field_utm_northing [-]: northness of the site.

  • field_utm_easting [-]: eastness of the site.

  • field_soil_subgroup[-]: the soil types.

Authors

  • Bonan Li - data collection, methology, coding
  • Matthias Sprenger - discussion and advisory
  • Tianfang Xu - discussion
  • John Nimmo - discussion
  • Hoori Ajami - discussion
  • Ryoko Araki - discussion
  • Octavia Crompton - discussion
  • Daniel Gimenez - provided soil matrix flow simulation, discussion
  • Jannis Groh - discussion
  • Daniel Hirmas - methology, provided soil data, and discussion
  • Nitin Singh - discussion
  • Briana Wyatt - discussion
  • Inge Wiekenkamp - discussion
  • Pamela Sullivan1 - discussion and advisory
  • Matthew T. Amato - provided soil matrix flow simulation

Related Resources

The content of this resource is derived from NEON (National Ecological Observatory Network). Soil water content and water salinity (DP1.00094.001), RELEASE-2023.
The content of this resource is derived from NEON (National Ecological Observatory Network). Soil water content and water salinity (DP1.00094.001), provisional data.
The content of this resource is derived from NEON (National Ecological Observatory Network). Soil physical and chemical properties, Megapit (DP1.00096.001), RELEASE-2023..
The content of this resource is derived from NEON (National Ecological Observatory Network). Explore Field Sites. Retrieved from https://www.neonscience.org/field-sites/explore-field-sites
The content of this resource is derived from NEON (National Ecological Observatory Network). Soil physical and chemical properties, distributed initial characterization (DP1.10047.001), RELEASE-2023.
This resource updates and replaces a previous version Li, B., M. Sprenger, B. M. Wyatt, D. Giménez, D. R. Hirmas, H. Ajami, I. Wiekenkamp, J. Groh, J. R. Nimmo, M. T. Amato, N. K. Singh, O. Cromtpon, R. Araki, T. Xu, P. L. Sullivan (2024). NEON Soil Preferential Flow Database, HydroShare, http://www.hydroshare.org/resource/a447dc8a74f44736bf3fe217c9228005

Credits

Funding Agencies

This resource was created using funding from the following sources:
Agency Name Award Title Award Number
USGS John Wesley Powell Center for Analysis and Synthesis
US Department of Energy Office of Science DE-AC02-05CH11231
The Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) project no. 460817082

How to Cite

Li, B., M. Sprenger, B. M. Wyatt, D. Giménez, D. R. Hirmas, H. Ajami, I. Wiekenkamp, J. Groh, J. R. Nimmo, M. T. Amato, N. K. Singh, O. Cromtpon, R. Araki, T. Xu, P. L. Sullivan (2025). NEON Soil Preferential Flow Database, HydroShare, https://doi.org/10.4211/hs.847b15cd15524b78acd58a2a8be242c1

This resource is shared under the Creative Commons Attribution CC BY.

http://creativecommons.org/licenses/by/4.0/
CC-BY

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