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Notebook for "Fluxes vs. Pools: Connecting Temperature Dependence and Sensitivity of Soil Carbon Dynamics Across Timescales""


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Created: Aug 13, 2025 at 2:28 p.m. (UTC)
Last updated: Jul 11, 2026 at 9:37 a.m. (UTC)
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Abstract

This Data Resource includes the Mathematica notebook developed to generate the Figures for the manuscript titled "Fluxes vs. Pools: Connecting Temperature Dependence and Sensitivity of Soil Carbon Dynamics Across Timescales". The Notebook can be run using Mathematica or through a Wolfram Engine. The abstract of the manuscript:

As global temperature (T) regimes shift, interest in understanding the biotic and abiotic mechanisms driving short- and long-term changes in soil organic carbon (SOC) dynamics is growing. Inconsistent terminology—particularly the use of T dependence and sensitivity—and varying methodological emphases on SOC pools versus fluxes can hinder the integration of experimental results with process-based models aimed at mechanistic insights into the T response of SOC processes. Here, after re-emphasizing the distinction between T dependence (function relating a SOC flux or pool to T) and T sensitivity (i.e., its T derivative), we demonstrate how the apparent T responses of SOC pools and heterotrophic respiration emerge from the T response of individual SOC fluxes. We then analyze SOC dynamics using experimental data and novel SOC modeling frameworks, examining both steady-state and transient responses, including the change in heterotrophic respiration following a step-change in T. Our analysis reveals that the T dependence of SOC pools is determined, in the long-term, by ratios of T response functions (e.g., Q10 ratios). This underscores the need to measure multiple SOC pools and fluxes and integrate process-based models to accurately estimate the T dependencies. The analysis also shows that the short-term T response of heterotrophic respiration is influenced by the ratio of the T response of microbial uptake and maintenance processes, while the long-term behavior arises from mass-balance constraints. Our findings offer a mechanistic basis for integrating flux- and pool-based studies and emphasize the importance of combining data and models to quantify SOC-T responses across temporal scales.

Subject Keywords

Coverage

Spatial

Coordinate System/Geographic Projection:
WGS 84 EPSG:4326
Coordinate Units:
Decimal degrees
North Latitude
67.3399°
East Longitude
8.0859°
South Latitude
2.8114°
West Longitude
-104.4141°

Temporal

Start Date:
End Date:

Content

Additional Metadata

Name Value
Figure generation Running the Notebook as is will automatically generate the Figures and export them to the working folder. For Figure 4, legends will also be exported automatically as separate image files.

Credits

Funding Agencies

This resource was created using funding from the following sources:
Agency Name Award Title Award Number
National Science Foundation None DEB-2241389

Contributors

People or Organizations that contributed technically, materially, financially, or provided general support for the creation of the resource's content but are not considered authors.

Name Organization Address Phone Author Identifiers
Aaron Thompson University of Georgia
Jennifer Pett-Ridge Lawrence Livermore National Laboratory
Sherlynette Pérez Castro University of North Carolina
Shibli Sadik Tulip Texas A&M University
ZIvko Nikolov Texas A&M University

How to Cite

Calabrese, S., Tulip, S. S., Castro, S. P., Thompson, A., Pett-Ridge, J., Nikolov, Z. (2026). Notebook for "Fluxes vs. Pools: Connecting Temperature Dependence and Sensitivity of Soil Carbon Dynamics Across Timescales"", HydroShare, http://www.hydroshare.org/resource/e5715e5d1b5b4ff597759c5e2c375ad1

This resource is shared under the Creative Commons Attribution CC BY.

http://creativecommons.org/licenses/by/4.0/
CC-BY

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