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Data associated with Elliott et al. Geochemical and sediment dynamics during an experimental high flow pulse event on the Allegheny River: Lessons for river system management


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Created: May 28, 2025 at 4:12 p.m. (UTC)
Last updated: Jun 13, 2025 at 2:15 p.m. (UTC)
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Abstract

High flow and flood events are important components of natural river flow regimes, as they maintain healthy aquatic habitats and riparian ecosystems. However, human alteration of rivers for flood control, including dam construction, modifies and homogenizes downstream hydrological patterns by moderating extreme high and low flows. In this study, we evaluate the biogeochemical fluxes stemming from the first experimental spring flood (i.e., pulse event) on the Allegheny River (Pennsylvania, USA) conducted by the United States Army Corps of Engineers as part of the Sustainable Rivers Project. The pulse event was initiated on March 30, 2023, by a sustained release of 451 cms from the Kinzua Dam for 21 hours. We hypothesized that this experimental spring pulse would initially lead to the release of organic-rich sediment and nutrients stored behind the Kinzua Dam. We also expected the "geochemical fingerprint" of downstream water to change over the duration of the pulse event due to the released flood water interacting with hyporheic water, scouring the channel and riparian areas, and then ultimately receding. To quantify the impact of the pulse on downstream biogeochemistry, we collected hourly water grab samples over a 48-hour period that spanned pre- and post-pulse conditions from multiple locations downstream of the Kinzua Dam. We evaluated the water chemistry of grab samples for multiple parameters, including concentrations of dissolved metals, nutrients, total suspended solids, and nitrate isotopes. Our results indicate that variable water chemistries can be linked to the timing and flushing of different portions of the river channel and floodplain across the span of the pulse event. These results demonstrate the value of downstream monitoring during pulse events for tracing flow dynamics, quantifying material fluxes, and documenting the impact of similar experimental spring floods on downstream river ecosystems.

This resource includes the data files of: environmental measurements (including but not limited to water temperature, pH, conductivity); hourly grab sample concentrations of dissolved metals, nutrients, total suspended solids, and nitrate isotopes; United States Geological Survey gage streamflow during the pulse event; and code associated with organizing data and calculations.

Subject Keywords

Coverage

Spatial

Coordinate System/Geographic Projection:
WGS 84 EPSG:4326
Coordinate Units:
Decimal degrees
Place/Area Name:
Allegheny River from Kinzua Dam to West Hickory (Pennsylvania, USA)
North Latitude
41.8627°
East Longitude
-78.9999°
South Latitude
41.5646°
West Longitude
-79.4469°

Temporal

Start Date:
End Date:

Content

README.txt

Overview
This resource contains hourly grab sample dissolved metals, nutrients, total suspended solids, and nitrate isotopes as well as environmental measurements and streamflow collected during the experimental pulse event on the Allegheny River beginning on March 30, 2023. See associated manuscript and supplemental information for sample collection, calculations, and analysis methods. 

Site key:
KD = Kinzua Dam collection site near USGS gage 03012550 (Allegheny River at Kinzua Dam)
WR = Warren collection site at private dock in Warren, PA
WRC = Allegheny River below Conewango Creek at Warren, PA (USGS gage 03015310)
WH = West Hickory collection site near USGS 03016000 (Allegheny River at West Hickory, PA)

Sondes: 
EXO2 Multiparameter Sonde (Yellow Springs Instruments, Yellow Springs, OH, USA) deployed at WR for duration of the pulse event 
SUNA Nitrate Sensor (Sea-Bird Scientific, Bellevue, WA, USA) deployed at WR for duration of the pulse event
AquaTroll 500 Multiparamter Sonde (Fort Collins, CO, USA) deployed at WH for duration of the pulse event
YSI handheld sondes (Yellow Springs Instruments, Yellow Springs, OH, USA) used at KD and WH with hourly grab samples

Filenames: 
ALL_data_masterfile.csv	master file of all data (streamflow, continuous, grab samples)
master_file_wrangling.R	R code including data merging, calculations, etc
In folder Continuous_Sonde_Data:
	WR_continuous_NO3_SUNA.csv	Warren dock site SUNA continuous nitrate
	WR_continuous_EXO2.csv	Warren dock site continuous pH, water temp, etc.
	WH_continuous_aquatroll.csv	West Hickory site continuous pH, water temp, etc.
In folder Hourly_Grab_Samples:
	grabsample_master_all3sites.csv	master file including only data from grab samples
	YSI_grabsamples.xlsx	Handheld YSI data taken in tandem with grab samples.
In folder USGS_streamflow:
	pulse_Q_data_pull.R		R code pulling streamflow data from USGS
	pulseQ_all3sites.csv		compiled USGS streamflow data 

Column description
Sample_ID: individual sample unique identifier
site: site of data point (KD = Kinzua Dam, WR = Warren dock, WRC = USGS gage at Warren below Conewango, WH = West Hickory)
Date: date of collection
TimeEDT: time of collection in local time zone (Eastern Daylight Time)
timging_group: timing group of samples determined by pulse hydrograph
Q_cfs: United States Geological Survey streamflow in cubic feet per second; see manuscript and SI for details regarding WR site streamflow
Q_cms: United States Geological Survey streamflow in cubic meters per second; see manuscript and SI for details regarding WR site streamflow
NO2_N_mgL: milligrams nitrite-N per liter, grab sample 
NO3_N_mgL: milligrams nitrate-N per liter, grab sample
NH4_N_mgL: milligrams ammonium-N per liter, grab sample
TP_ugL: micrograms total phosphorus per liter, grab sample
TN_mgL: milligrams total nitrogen per liter, grab sample
DON_mgL: milligrams dissolved organic nitrogen per liter, grab sample
d15N_NO3: ?15N of nitrate per mille, grab sample
d18O_NO3: ?18O of nitrate per mille, grab sample
d2H_H2O: ?2H of water per mille, grab sample
d18O_H2O: ?18O of water per mille, grab sample
TOC_mgL: milligrams total organic carbon per liter, grab sample
Li_ppm: lithium parts per million, grab sample
B_ppm: boron parts per million, grab sample
Na_ppm: sodium parts per million, grab sample
Mg_ppm: magnesium parts per million, grab sample
Al_ppm: aluminum parts per million, grab sample
Si_ppm: silicon parts per million, grab sample
P_ppm: phosphorus parts per million, grab sample
K_ppm: potassium parts per million, grab sample
Ca_ppm: calcium parts per million, grab sample
Sc_ppm: scandium parts per million, grab sample
Ti_ppm: titanium parts per million, grab sample
V_ppm: vanadium parts per million, grab sample
Cr_ppm: chromium parts per million, grab sample
Mn_ppm: manganese parts per million, grab sample
Fe_ppm: iron parts per million, grab sample
Co_ppm: cobalt parts per million, grab sample
Ni_ppm: nickel parts per million, grab sample
Cu_ppm: copper parts per million, grab sample
Zn_ppm: zinc parts per million, grab sample
As_ppm: arsenic parts per million, grab sample
Se_ppm: selenium parts per million, grab sample
Rb_ppm: rubidium parts per million, grab sample
Sr_ppm: strontium parts per million, grab sample
Zr_ppm: zirconium parts per million, grab sample
Mo_ppm: molybdenum parts per million, grab sample
Ag_ppm: silver parts per million, grab sample
Cd_ppm: cadmium parts per million, grab sample
In_ppm: indium parts per million, grab sample
Sn_ppm: tin parts per million, grab sample
Sb_ppm: antimony parts per million, grab sample
Cs_ppm: cesium parts per million, grab sample
Ba_ppm: barium parts per million, grab sample
La_ppm: lanthanum parts per million, grab sample
Ce_ppm: cerium parts per million, grab sample
W_ppm: tungsten parts per million, grab sample
Pb_ppm: lead parts per million, grab sample
Bi_ppm: bismuth parts per million, grab sample
U_ppm: uranium parts per million, grab sample
TN_TP: total nitrogen to total phosphorus molar ration
TOC_TN: total organic carbon to total nitrogen molar ratio
Ca_Sr: calcium to strontium molar ratio
Chlorophyll_RFU: chlorophyll relative fluorescence units (EXO2 at WR)
Cond_uScm: conductivity in microSiemens per centimeter (EXO2 at WR)
Depth_m: depth of sonde in meters (EXO2 at WR)
fDOM_QSU: fluorescent dissolved organic matter quinine sulfate units (EXO2 at WR)
fDOM_RFU: fluorescent dissolved organic matter relative fluorescence units (EXO2 at WR)
nLF_Cond_uScm: (EXO2 at WR)
ODO_persat: optical dissolved oxygen percent saturation, corrected with temperature and local barometric pressure at the time of calibration (EXO2 at WR)
ODO_perlocal: optical dissolved oxygen corrected with temperature and percent saturation (EXO2 at WR)
ODO_mgL: dissolved oxygen in milligrams per liter (EXO2 at WR)
Pressure_psi_a: atmospheric pressure in pounds per square inch (EXO2 at WR)
Sal_psu: salinity in practical salinity units (EXO2 at WR)
SpCond_uScm: specific conductivity in microSiemens per centimeter (EXO2 at WR)
TAL_PC_RFU: phycocyanin in relative fluorescence units (EXO2 at WR)
TDS_mgL: milligrams total dissolved solids per liter (EXO2 at WR)
Tubidity_FNU: turbidity in formazin nephelometric units (EXO2 at WR)
Wiper_Position_volt: wiper position (EXO2 at WR)
pH: water pH (EXO2 at WR)
pH_mV: water pH in millivolts (EXO2 at WR)
Temp_C: water temperature in degrees Celsius (EXO2 at WR and AquaTroll at WH)
VerticalPosition_m: vertical position of sonde in meters (EXO2 at WR)
Battery_V: battery voltage (EXO2 at WR)
Cable_Pwr_V: cable power voltage (EXO2 at WR)
NO3_mgL_suna: milligrams nitrate per liter, continuous (SUNA at WR)
Temp_C1_air: air temperature in degrees Celsius (AquaTroll at WH)
pH_aquatroll: water pH (AquaTroll at WH)
ORP_mV: oxidizing-reducing potential millivolts (AquaTroll at WH)
Actual_Conductivity_uScm: actual conductivity in microSiemens per centimeter (AquaTroll at WH)
Specific_Conductivity_uScm: specific conductivity in microSiemens per centimeter (AquaTroll at WH)
Salinity_PSU: salinity in practical salinity units (AquaTroll at WH)
Total_Dissolved_Solids_ppt: total dissolved solids in parts per trillion (AquaTroll at WH)
Turbidity_NTU: turbidity in nephelometric turbidity units (AquaTroll at WH)
RDO_Concentration_mgL: rugged dissolved oxygen in milligrams per liter(AquaTroll at WH)
RDO_Saturation_perSat: rugged dissolved oxygen in percent saturation (AquaTroll at WH)
Oxygen_Partial_Pressure_Torr: oxygen partial pressure in Torr (AquaTroll at WH)
Barometric_Pressure_mmHg: barometric pressure in millimeters of mercury (AquaTroll at WH)
Pressure_psi: pressure in pounds per square inch (AquaTroll at WH)
Depth_ft: sonde depth in feet (AquaTroll at WH)
pH_ysi: water pH (handheld YSI sonde at KD and WH)
T_degC_ysi: water temperature in degrees Celsius (handheld YSI sonde at KD and WH)

Notes: 
BDL = below detection limit
NA = missing or not available

Related Resources

This resource is described by Elliott, E.M., Sinon, H., Yancy, A.J., Butkus, C.R., Zuccolotto, G., Weitzman, J.N., Bain, D.J., Ozpolat, E., Ayo-Bali, A., Zidar, K., Whitmire, S.L. Geochemical and sediment dynamics during an experimental high flow pulse event on the Allegheny River: Lessons for river system management. Biogeochemistry. https://doi.org/10.1007/s10533-025-01243-6

Credits

Funding Agencies

This resource was created using funding from the following sources:
Agency Name Award Title Award Number
U.S. National Science Foundation 1939977
National Institute of Food and Agriculture 1700590
Kenneth P. Dietrich School of Arts and Sciences
Pittsburgh Water Collaboratory

How to Cite

Yancy, A. J., E. M. Elliott, H. Sinon, C. R. Butkus, G. Zuccolotto, J. N. Weitzman, D. J. Bain, E. Özpolat, A. Ayo-Bali, K. Zidar, S. Whitmire (2025). Data associated with Elliott et al. Geochemical and sediment dynamics during an experimental high flow pulse event on the Allegheny River: Lessons for river system management, HydroShare, http://www.hydroshare.org/resource/1859c5d39c7b41a2bf296d2e0e08f52b

This resource is shared under the Creative Commons Attribution CC BY.

http://creativecommons.org/licenses/by/4.0/
CC-BY

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