Lettuce Field UAV Time Series Summer 2019


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Resource type: Composite Resource
Storage: The size of this resource is 8.8 GB
Created: Jun 29, 2020 at 6:20 p.m.
Last updated: Jun 30, 2020 at 12:58 a.m.
DOI: 10.4211/hs.1c5855dbeb3c49a8b5779300550e08f1
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Content types: Geographic Feature Content  Geographic Raster Content 
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Abstract

Flower opening and closure are traits of reproductive importance in all angiosperms because they determine the success of self- and cross-pollination. Different accessions of cultivated and wild lettuce were observed to flower at different times of day. An F6 recombinant inbred line population (RIL) had been derived from accessions of L. serriola accession Armenian999 x L. sativa landrace PI251246 that originated from different environments and differed markedly for daily floral opening time. The 236 RILs, both parental lines, and two controls, L. sativa cv. Salinas and L. serriola accession UC96US23, were grown in summer 2019 at the Department of Plant Sciences field facility in Davis, CA. The experiment had two complete randomized blocks, each consisting of 240 plots to accommodate the 240 genotypes. Within each block, eight individuals of each RIL or parent were planted into one 10 ft x 1 row plot.

Seven ground control points were set up in the field, four near the corners and three along the field’s East-West centerline. GPS coordinates, with an accuracy within a few centimeters, were recorded using a handheld data collector (Trimble Geo 7x Series). These coordinates were used in processing drone images to ensure that images collected at different times and dates aligned perfectly with one another.

A MicaSense RedEdge multi-spectral camera was mounted on a DJI Matrice100 drone. The camera captured images at five wavelengths: blue (475 nm center, 20 nm bandwidth), green (560 nm center, 20 nm bandwidth), red (668 nm center, 10 nm bandwidth), red edge (717 nm center, 10 nm bandwidth), and near-infrared (840 nm center, 40 nm bandwidth). In this study, only the blue, green, and red wavelengths were used for flower identification. The drone was flown over the experimental field at 9 am, 11 am, 1 pm and 3 pm on July 1st, 2019, and 10 am, 12 pm, 2 pm and 4 pm on July 9th, 2019. A DJI GS Pro app was used to plan and execute the flight. The drone flew at 15 meters above ground, and images were taken at a frequency that ensured 85% front- and side-overlaps between each pair of adjacent images. A MicaSense calibration panel was used for automated adjustment of the reflectance spectra. Raw images from the camera were stitched and processed with the Pix4DMapper Pro photogrammetry software to generate orthomosaic maps of surface reflectance at 1 cm spatial resolution. On average, 2,309 raw images were generated per time point, and 2,181 raw images were used to assemble each five-spectrum field map. With the reconstructed maps, the borders of individual plots were manually determined using the software ArcMap.

Subject Keywords

Resource Level Coverage

Spatial

Coordinate System/Geographic Projection:
WGS 84 EPSG:4326
Coordinate Units:
Decimal degrees
North Latitude
38.5392°
East Longitude
-121.7823°
South Latitude
38.5366°
West Longitude
-121.7834°

Temporal

Start Date:
End Date:

Content

Data Services

The following web services are available for data contained in this resource. Geospatial Feature and Raster data are made available via Open Geospatial Consortium Web Services. The provided links can be copied and pasted into GIS software to access these data. Multidimensional NetCDF data are made available via a THREDDS Data Server using remote data access protocols such as OPeNDAP. Other data services may be made available in the future to support additional data types.

Credits

Funding Agencies

This resource was created using funding from the following sources:
Agency Name Award Title Award Number
National Science Foundation Graduate Research Fellowship Program
United States Department of Agriculture Specialty Crop Research Initiative 2015-51181-24283

Contributors

People or Organizations that contributed technically, materially, financially, or provided general support for the creation of the resource's content but are not considered authors.

Name Organization Address Phone Author Identifiers
Andy j. Y. Wong University of California, Davis

How to Cite

Han, R., A. Wong, Z. Tang, D. Feinberg (2020). Lettuce Field UAV Time Series Summer 2019, HydroShare, https://doi.org/10.4211/hs.1c5855dbeb3c49a8b5779300550e08f1

This resource is shared under the Creative Commons Attribution CC BY.

 http://creativecommons.org/licenses/by/4.0/
CC-BY

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