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(EarthCube2020) An Approach for Open and Reproducible Environmental Modeling
A newer version of this resource http://www.hydroshare.org/resource/75f31565dbd24c198450b9d37c6fcf74 is available that replaces this version.
An older version of this resource http://www.hydroshare.org/resource/dea233478adf45ee8f71fb878828951e is available.
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Created: May 17, 2020 at 10:45 p.m.
Last updated: May 18, 2020 at 12:24 a.m.
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Sharing Status: Public
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Abstract

This is a HydroShare resource to demonstrate an approach for open and reproducible Environmental Environmental Modeling during EarthCube2020 meeting (https://www.earthcube.org/EC2020).

You can start a Jupyter notebook ("First_NB_An_Approach_for_Open_Reproducible_Environmental_Modeling.ipynb") using "CyberGIS-Jupyter for water" on "Open with ..." Button.
Through the 1st notebook demonstration, you can experience open and reproducible environmental modeling using three main components which are online repository (HydroShare), computational environment (CyberGIS-Jupyter for water), and model API(pySUMMA).
Also, you will create a Sciunit container to encapsulate every dependency for SUMMA execution in CybeGIS-Jupyter into the Sciunit container.

Then you can move to the 2nd notebook (Second_NB_An_Approach_for_Open_Reproducible_Environmental_Modeling.ipynb) to evaluate reproducibility and replicability of the SUMMA Sciunit container in different cyberinfrastructure (CUAHSI JupyterHub).

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Content

Related Resources

The content of this resource references Clark, M. P., B. Nijssen, J. D. Lundquist, D. Kavetski, D. E. Rupp, R. A. Woods, J. E. Freer, E. D. Gutmann, A. W. Wood, D. J. Gochis, R. M. Rasmussen, D. G. Tarboton, V. Mahat, G. N. Flerchinger, D. G. Marks, 2015b: A unified approach for process-based hydrologic modeling: Part 2. Model implementation and case studies. Water Resources Research, http://doi.org/10.1002/2015WR017200.
The content of this resource references Clark, M. P., B. Nijssen, J. D. Lundquist, D. Kavetski, D. E. Rupp, R. A. Woods, J. E. Freer, E. D. Gutmann, A. W. Wood, L. D. Brekke, J. R. Arnold, D. J. Gochis, R. M. Rasmussen, 2015a: A unified approach for process-based hydrologic modeling: Part 1. Modeling concept. Water Resources Research, http://doi.org/10.1002/2015WR017198.
This resource updates and replaces a previous version Choi, Y., J. Goodall, J. Sadler, A. M. Castronova, A. Bennett, T. Malik, B. Nijssen, Z. (. Li, S. Wang, M. Clark, D. Tarboton, M. Deeds (2022). (EarthCube2020) An Approach for Open and Reproducible Environmental Modeling, HydroShare, http://www.hydroshare.org/resource/dea233478adf45ee8f71fb878828951e
The content of this resource is derived from http://www.hydroshare.org/resource/75f31565dbd24c198450b9d37c6fcf74
This resource has been replaced by a newer version Choi, Y., J. Goodall, J. Sadler, A. M. Castronova, A. Bennett, T. Malik, B. Nijssen, Z. Li, S. Wang, M. Clark, D. Tarboton, M. Deeds (2021). EarthCube2020: An Approach for Open and Reproducible Environmental Modeling, HydroShare, http://www.hydroshare.org/resource/75f31565dbd24c198450b9d37c6fcf74

Credits

Funding Agencies

This resource was created using funding from the following sources:
Agency Name Award Title Award Number
National Science Foundation EarthCube Building Blocks: Collaborative Proposal: GeoTrust: Improving Sharing and Reproducibility of Geoscience Applications ICER-1639655, ICER-1639759, ICER-1639696
National Science Foundation Collaborative Research: SI2-SSI: Cyberinfrastructure for Advancing Hydrologic Knowledge through Collaborative Integration of Data Science, Modeling and Analysis OAC-1664061, OAC-1664018, OAC-1664119

How to Cite

Choi, Y., T. Malik, M. Deeds, R. Ahmad (2020). (EarthCube2020) An Approach for Open and Reproducible Environmental Modeling, HydroShare, http://www.hydroshare.org/resource/224556101f3641109910595b4a761276

This resource is shared under the Creative Commons Attribution CC BY.

 http://creativecommons.org/licenses/by/4.0/
CC-BY

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