A Sciunit Container to Reproduce VIC (Variable Infiltration Capacity) Pre-Processing Workflow


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Created: Apr 28, 2021 at 9:40 a.m.
Last updated: Mar 24, 2022 at 6:36 p.m.
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Abstract

This resource contains the containerized code for the pre-processing pipeline for the Variable Infiltration Capacity(VIC) Model in Hydrology.

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README.md

Container for VIC Model Pre-processing

This resource contains the code and data for the pre-processing pipeline of the Variable Infiltration Capacity (VIC) model in Hydrology. This pipeline is containarized using Provenance to Use (PTU) module used internally by Sciunit:

Provenance to Use

The tar archive in this resource contains the relevant code and data in the cde-package/cde-root directory. To reproduce the model execution, follow these instructions on a Linux machine:

  1. tar -xvf ptu_VIC_all.tar.gz -C .

  2. cd ptu-Nov10/cde-root/var/lib/irods/iRODS/server/bin

  3. ./script_6.scr.cde

The pre-processing pipeline code is in the file script_6.scr located at:

cde-root/var/lib/irods/iRODS/server/bin/cmd/

Related Resources

This resource is described by Essawy, B. T., J. L. Goodall, W. Zell, D. Voce, M. M. Morsy, J. Sadler, Z. Yuan and T. Malik, (2018), "Integrating scientific cyberinfrastructures to improve reproducibility in computational hydrology: Example for HydroShare and GeoTrust," Environmental Modelling & Software, 105: 217-229, https://doi.org/10.1016/j.envsoft.2018.03.025.

How to Cite

Ahmad, R., D. Tarboton, T. Malik, A. Nassar, J. Goodall (2022). A Sciunit Container to Reproduce VIC (Variable Infiltration Capacity) Pre-Processing Workflow, HydroShare, http://www.hydroshare.org/resource/c7619f345a364b8bb27e87c0b9213a75

This resource is shared under the Creative Commons Attribution CC BY.

http://creativecommons.org/licenses/by/4.0/
CC-BY

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