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Sciunit package to containerize the collaborative hydrologic modeling from three Jupyter Notebook(getdata, analysis, and outputviz) as an example of SUMMA


Authors: YOUNG-DON CHOI
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Created: May 24, 2019 at 4:04 p.m.
Last updated: Jun 04, 2019 at 4:12 a.m.
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Sharing Status: Public
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Abstract

This is an example of how to create sciunit package from Jupyter Notebooks. For this example, I divided a well organized Jupyer Notebook to general three steps such as 1) get data, 2) analysis, 3) output visualization. So I recreated (1) getdata.ipynb, (2) analysis.ipynb, (3) output_viz.ipynb from a well organized Jupyter Notebook.
Then, we can create a sciunit package using "1_creating_sciunit_package_using_three_step_getdata_analysis_outputviz_jupyter_notebook.ipynb".
From the previous step, we can create a sciunit package and upload it on HydroShare as a new resource. In addition, we will add "2_testing_sciunit_repeat_and_visualization.ipynb" into new HydroShare resource. After that, we open new HydroShare resource, and use "2_testing_sciunit_repeat_and_visualization.ipynb" to repeat sciunit package to test reproducibility.

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This resource belongs to the following collections:
Title Owners Sharing Status My Permission
2019 EarthCube Conference Demo presentation material for advanced collaborative modeling framework YOUNG-DON CHOI  Public &  Shareable Open Access

How to Cite

CHOI, Y. (2019). Sciunit package to containerize the collaborative hydrologic modeling from three Jupyter Notebook(getdata, analysis, and outputviz) as an example of SUMMA, HydroShare, http://www.hydroshare.org/resource/99ebc7d2633e4327ae140bc2aa23b82f

This resource is shared under the Creative Commons Attribution CC BY.

 http://creativecommons.org/licenses/by/4.0/
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